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Santorini

$70+ Cheap flights from Heraklion to Thera (HER - JTR)

This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 6/6. Fares are subject to change and may not be available on all flights or dates of travel.
HER — JTR
Jan 11 — Jan 181
Sun 1/11
Sun 1/18
1 adult, Economy
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Cheap flight deals from Heraklion to Santorini

One-way flights from Heraklion to Santorini
Search for one-way flight options from Heraklion to Santorini. Find affordable one-way fares based on user searches. Data last updated December 12, 2025.

This Mytrip deal was found by Cheapflights users on 12/10. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Mytrip is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 6/66:55 pmHER - JTR
1 stop2h 20mSky Express
Deal found 12/10$70
This Mytrip deal was found by Cheapflights users on 12/9. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Mytrip is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 4/2811:20 pmHER - JTR
1 stop8h 30mMultiple Airlines
Deal found 12/9$73
This Aegean Airlines deal was found by Cheapflights users on 12/11. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Aegean Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 5/511:20 pmHER - JTR
1 stop7h 15mAegean Airlines
Deal found 12/11$98
This Booking.com deal was found by Cheapflights users on 12/10. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Booking.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 6/67:30 pmHER - JTR
2 stops20h 25mAegean Airlines
Deal found 12/10$241
This Mytrip deal was found by Cheapflights users on 12/9. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Mytrip is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 4/287:00 amHER - JTR
2 stops24h 50mHahn Air Systems
Deal found 12/9$271

Find flight deals from Heraklion to Santorini

Discover tips and strategies to find the most affordable flight options for your journey from Heraklion (HER) to Santorini (JTR). Learn about various techniques such as flexible date searches, comparing prices across and setting up price alerts. Use these methods to find the cheapest flights available for your travel needs. Data last updated December 12, 2025.

Most accurate provider

eDreams
3 stars

Most trusted provider

eDreams
3 stars

Popular in

April

Cheapest in

May
Provider with most accurate pricing for Heraklion N. Kazantzakis Apt.-Thera Santorini flight deals.
Search Deals
Provider most trusted by Cheapflights users for Heraklion N. Kazantzakis Apt.-Thera Santorini flights.
Search Deals
Highest demand for flights based on searches. 5% potential increase in price ($14 potential increase over avg. RT price).
Search Deals
Cheapest flight prices on average. 6% potential price decrease ($13 potential savings vs. average RT price).
Search Deals

Cheapflights Fare Finder

 
Customize your flight search to find flights from Heraklion to Santorini that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 2,558,603 searches. Data last updated December 12, 2025.
Use the filters below to find and compare flights from Heraklion to Thera that are best for you.

Fly from

Heraklion

Fly to

Santorini

Route

Depart

Return

Price

HeraklionThera

HER - JTR

HERJTR

Heraklion N. Kazantzakis Apt.

Tue 4/28

11:20 pm-7:50 am

1 stop8h 30m

$73

HeraklionThera

HER - JTR

HERJTR

Heraklion N. Kazantzakis Apt.

Tue 5/5

11:20 pm-6:35 am

1 stop7h 15m

$98

HeraklionThera

HER - JTR

HERJTR

Heraklion N. Kazantzakis Apt.

Sat 6/6

7:30 pm-3:55 pm

2 stops20h 25m

$241

HeraklionThera

HER - JTR

HERJTR

Heraklion N. Kazantzakis Apt.

Tue 4/28

7:00 am-7:50 am

2 stops24h 50m

$271

Flights are sorted by cheapest round-trip flights first.

Deals found on 12/9

Compare providers for flights from Heraklion to Santorini

Provider information is updated monthly. Please note that these providers often have deals for this flight, but the availability may vary on a day-by-day basis on Cheapflights.
Use the table below to compare price accuracy, trust ratings, and cancellation policies for each provider offering flight deals from Heraklion to Santorini in December.
ProviderPrice AccuracyTrust Score*
eDreamsPrice Accuracy3 starsTrust Score*3 stars
FlightHubPrice Accuracy3 starsTrust Score*1 star

*The Trust Score is based on feedback from users after their booking experience. It measures overall satisfaction, helping us identify issues like hidden fees, problems during the ticketing process, and the quality of customer service. This score is our best indicator of the provider's quality and reliability.

  • Most accurate provider: When it comes to deals on Heraklion-Thera flights, users find the pricing of eDreams to be most consistent on Cheapflights vs. eDreams Users can find the same prices on Heraklion-Thera flight deals on Cheapflights vs. eDreams >95% of the time. Price accuracy is based on data collected from Heraklion-Thera flight searches over the past month and is updated monthly.
  • Most trusted provider: When it comes to deals on Heraklion-Thera flights, Cheapflights users trust eDreams the most. eDreams has received a user feedback score of 3 out of 3 stars (3 being the best), meaning they have been trusted the most by Cheapflights users looking for Heraklion-Thera flight deals. Provider user feedback score is based on Cheapflights searches over the past month and is updated monthly.

Best time to book a flight from Heraklion to Santorini

Have a flexible travel schedule? Discover the best time to fly to Santorini from Heraklion with our price prediction graph.
Estimated round-trip price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Cheapflights Insights

Everything you need to know about your flight from Heraklion to Thera

How often are flights from Heraklion to Thera delayed?

About 0% of weekly flights between Heraklion and Thera have experienced delays in the past year, with the average delay time being 0 minutes.

What is the most punctual flight time for Heraklion to Thera flights?

Historically, flights departing in the morning are less likely to be delayed, whereas flights leaving in the early afternoon tend to experience delays more often.

What day of the week experiences the fewest flight delays on this route?

Friday tends to have the lowest number of delays on this route, whereas Sunday has historically faced a higher average of delays compared to other days of the week.

Related info for your journey

Find useful and relevant information for your journey from Heraklion to Santorini. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.

  • Can I find deals for flights from Heraklion to Santorini that include hotel bookings?

    Yes. In addition to deals on Heraklion to Santorini flights, Cheapflights offers vacation packages that include both flights and hotel.

  • How can I find direct flights from Heraklion to Santorini?

    After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Heraklion to Santorini.

  • Can I find deals for business class flights from Heraklion to Santorini?

    Yes. Cheapflights offers flight deals from Heraklion to Santorini by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

Traveling to a place near Thera?

Book flights to Thera if you plan to visit one of these locations
Oia
Kamari
Imerovigli

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