Missoula

$607+ Cheap flights from Juneau to Missoula (JNU - MSO)

This is the cheapest round-trip flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 8/22. Fares are subject to change and may not be available on all flights or dates of travel.
JNU — MSO
Aug 2 — Aug 91
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Cheap flight deals from Juneau to Missoula

Discover tips and strategies to find the most affordable flight options for your journey from Juneau (JNU) to Missoula (MSO). Learn about various techniques such as flexible date searches, comparing prices across and setting up price alerts. Use these methods to find the cheapest flights available for your travel needs. Data last updated July 28, 2025.

Round-trip from

$607
(Alaska Airlines)
From Juneau Intl to Missoula Johnson-Bell Field

Find flight deals from Juneau to Missoula

Cheapest flights from Juneau to Missoula
Explore the most affordable flight options available from Juneau to Missoula. Find the lowest fares from popular airlines and budget airlines, with prices last updated on July 28, 2025.

This Alaska Airlines deal was found by Cheapflights users on 7/27. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Alaska Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 8/226:50 pmJNU - MSO
1 stop18h 28mAlaska Airlines
Sun 8/312:14 pmMSO - JNU
2 stops9h 15mAlaska Airlines
Deal found 7/27$607

Cheapflights Fare Finder

 
Customize your flight search to find flights from Juneau to Missoula that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 2,558,603 searches. Data last updated July 28, 2025.
Use the filters below to find and compare flights from Juneau to Missoula that are best for you.

Fly from

Juneau

Fly to

Missoula

Route

Depart

Return

Price

JuneauMissoula

JNU - MSO

JNUMSO

Juneau Intl

Fri 8/22

6:50 pm-3:18 pm

1 stop18h 28m

Missoula Johnson-Bell Field

Sun 8/31

2:14 pm-7:58 pm

1 stop7h 44m

$607

Flights are sorted by cheapest round-trip flights first.

Deals found on 7/27

Best time to book a flight from Juneau to Missoula

Have a flexible travel schedule? Discover the best time to fly to Missoula from Juneau with our price prediction graph.
Estimated round-trip price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Reviews of airlines servicing Missoula

Get insights into the airlines that provide service to Missoula. Read reviews, discover amenities, and learn about the overall travel experience offered by airlines. Use this information to make informed decisions when choosing an airline for your flight to Missoula. Reviews last updated July 28, 2025.
Get a feel of what it's like to fly with Alaska Airlines from Juneau to Missoula by reading reviews from past customers. Users have also rated airlines in terms of entertainment options, comfort, food, crew/service, and boarding process.

Comfort

7.8

Boarding

8.1

Entertainment

7.1

Crew

8.5

Overall

8.0

Food

7.1

Reviews

1 / 20
10.0
Excellent

Jonathan,Jul 2025

SEA - BOS

Fantastic Check-in with easy baggage drop. While it took a while to find out which was the gate, the boarding was a dream, the stewards were simply incredible and the flight fantastic.

Comfort

7.8

Boarding

8.1

Entertainment

7.1

Crew

8.5

Overall

8.0

Food

7.1

Reviews

1 / 20
10.0
Excellent

Jonathan,Jul 2025

SEA - BOS

Fantastic Check-in with easy baggage drop. While it took a while to find out which was the gate, the boarding was a dream, the stewards were simply incredible and the flight fantastic.

Related info for your journey

Find useful and relevant information for your journey from Juneau to Missoula. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.
  • Can I find deals for flights from Juneau to Missoula that include hotel bookings?

    Yes. In addition to deals on Juneau to Missoula flights, Cheapflights offers vacation packages that include both flights and hotel.

  • How can I find direct flights from Juneau to Missoula?

    After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Juneau to Missoula.

  • Can I find deals for business class flights from Juneau to Missoula?

    Yes. Cheapflights offers flight deals from Juneau to Missoula by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

  • What is the cheapest month to book a flight from Juneau to Missoula?

    Currently, October is the cheapest month in which you can book a flight from Juneau to Missoula (average of $365). Flying from Juneau to Missoula in March is currently the most expensive (average of $506). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

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